PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr11P13210_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 177aa    MW: 19628.3 Da    PI: 7.1296
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr11P13210_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-1074121455
                             HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                     HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR++iN+++ +L+  +P +    +k +  a +L +++ Y++sLq
  GSMUA_Achr11P13210_001  74 SHSLAERERRKKINERMRRLQNQIPGC----HKTMGMARMLDQTISYVRSLQ 121
                             8*************************9....788*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.31E-1068123No hitNo description
SuperFamilySSF474594.84E-1568128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.00870120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.8E-1671127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.1E-874121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-676126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MAEFAQGLDC LLPSFLSMDA DPSLELMSQL AELNGSAMEN PSMGFQGGKS NSKQVEKPEE  60
VVHVRARRGE ATDSHSLAER ERRKKINERM RRLQNQIPGC HKTMGMARML DQTISYVRSL  120
QNQFLSMELS AASYLSDFGL GVDAIATAQA EKAHEGGEAG RLLRKRHGDC NGFHMPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009383609.16e-92PREDICTED: transcription factor bHLH75-like
SwissprotQ8GZ133e-39BEE1_ARATH; Transcription factor BEE 1
TrEMBLM0RRV11e-130M0RRV1_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr11P13210_0011e-129(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15639615
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.12e-40BR enhanced expression 1